AssigningSecondaryStructure.assign_secondary_structure
— Methodassign_secondary_structure(chain_backbone::Array{T,3}}) where T<:Real
assign_secondary_structure(chain_backbones::Vector{Array{T,3}}) where T<:Real
Given a vector of chain backbones, each represented as a 3-dimensional array of size 3x3xL, this function assigns the secondary structure to each residue.
Returns a vector of vectors of integers, each of which is the secondary structure assignment for the corresponding chain and their respective residues. The secondary structure encoded as follows:
1
: loop (neither helix nor strand)2
: helix; α, 3_10, or π3
: strand; part of a β-sheet