This package provides data representation and IO tools for the bigBed file format. The bigBed binary file format is for representing genomic annotations. It is indexed to fetch specific regions quickly and is often created from BED files.
The latest version of BigBed is made available to install through BioJulia's package registry. By default, Julia's package manager only includes the "General" package registry.
registry add https://github.com/BioJulia/BioJuliaRegistry.git
Once the registry is added to your configuration, you can install BigBed while in pkg mode with the following:
If you are interested in the cutting edge of the development, please check out the develop branch to try new features before release.
BigBed is tested against Julia
1.X on Linux, OS X, and Windows.
Latest build status:
We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.
We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development the core contributors and the person who filed the expense will be reimbursed.
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